The action takes place several months after the end of the first part. Morpheus, Neo and Trinity are going to meet with other masters, to learn where that copy machine tunnel to get to the last bastion of humanity - of Zion. Morpheus decides that a ship is to wait for contact from Oracle, and the rest will go back under the command of Zion. At the same meeting, Neo gets an item from Smith (who does not already funkconuje as agent and the first part is not already used that title), which is the symbol of "freedom". Meanwhile, in Zion comes to a big meeting, which speaks Morpheus. Tells the truth about the threat from the machines, but makes his speech that people have hope for salvation. After a short time, Neo receives dispatch from Oracle, whereby the to the meeting. When Chosen talks with Oracle, this tells him that he must find the source of Matriksa. For this you need Klucznik. When Oracle leaves, Smith appears with their clones, and inform the merger between the heroes - Neo and former agent. Spectacular combat ends with the moment escaped the main character trilogy. When Nebuchadnezzar lands in Zion for recharging, the commander of Zion defense - commander Lock - karci Morpheus zostawiania order for one of the ships.
